Publications

Handika, H. and Esselstyn, J. A. 2024. SEGUL: Ultrafast, memory-efficient and mobile-friendly software for manipulating and summarizing phylogenomic datasets. Molecular Ecology Resources, 24(7). https://doi.org/10.1111/1755-0998.13964

Nations, J. A., Handika, H. , Mursyid, A., Butsa, R. D., Apandi, Achmadi, A. S. Esselstyn, J. A. 2024. Three new species of shrew (Soricidae: Crocidura) from West Sumatra, Indonesia: elevational and morphological divergence in syntopic sister taxa. Journal of Mammalogy, 105 (2), 372-389. https://doi.org/10.1093/jmammal/gyad126

Mursyid, A., Achmadi, A.S., Novarino, W., Handika, H. , Nugroho, H.A., Anita, S., Adams, A.L., Rowe, K.M.C. and Rowe, K.C. 2023. Trypanosoma (Euglenozoa: Kinetoplastea) infections in rodents, bats, and shrews along an elevation and disturbance gradient in Central Sulawesi, Indonesia. Contributions to Mammalogy and Zooarchaeology of Wallacea, pp.663-671. http://dx.doi.org/10.3853/j.2201-4349.75.2023.1786

Achmadi, A. S., Fahri, F., Gazzard, A., Handika, H. , Inayah, N., Kennerley, R. J., Lanusi, A. A., Nangoy, M., Nurdin, M. R., Rowe, K. C., Sheherazade. 2023. Conservation status and priorities for Sulawesi's unique small mammal fauna. Journal of Mammalogy, 104 (3), 1-12. https://doi.org/10.1093/jmammal/gyad126

Swanson, M.T., Henson, M.W., Handika, H. , Achmadi, A.S., Anita, S., Rowe, K.C. and Esselstyn, J.A. 2023. Mycoplasmataceae dominate microbial community differences between gut regions in mammals with a simple gut architecture. Journal of Mammalogy, 104(1), pp.146-158. https://doi.org/10.1093/jmammal/gyac098

Esselstyn, J.A., Achmadi, A.S., Handika, H. , Swanson, M. T., Giarla, T.C. and Rowe, K.C. 2021. Fourteen new, endemic species of shrew (genus Crocidura) from Sulawesi reveal a spectacular island radiation. Bulletin of the American Museum of Natural History, 454(1), pp.1-108. https://doi.org/10.1206/0003-0090.454.1.1

Nations, J.A., Mursyid, A., Darma Busta, R., Adrian, S.P., Handika, H. , Apandi, Achmadi, A.S. and Esselstyn, J.A. 2021. The first report of albinism in a Sundaland endemic rodent. Mammalia, 85(2), pp.168-172. https://doi.org/10.1515/mammalia-2020-0047

Harapan, T.S., Agung, A.P., Handika, H. , Novarino, W., Tjong, D.H. and Tomlinson, K.W. 2020. ew records and potential geographic distribution of Elongated Caecilian, Ichthyophis elongatus Taylor, 1965 (Amphibia, Gymnophiona, Ichthyophiidae), endemic to West Sumatra, Indonesia. Check List, , 16(6), pp. 1695-1701. https://doi.org/10.15560/16.6.1695

Winterhoff, M.L., Achmadi, A.S., Roycroft, E.J., Handika, H. , Putra, R.T.J., Rowe, K.M.C., Perkins, S. and Rowe, K.C. 2020. Native and introduced trypanosome parasites in endemic and introduced murine rodents of Sulawesi. Journal of Parasitology, 106(5), pp.523-536. https://doi.org/10.1645/19-136

Esselstyn, J.A., Achmadi, A.S., Handika, H. , Giarla, T.C. and Rowe, K.C. 2019. A new climbing shrew from Sulawesi highlights the tangled taxonomy of an endemic radiation. Journal of Mammalogy, 100(6), pp.1713-1725. https://doi.org/10.1093/jmammal/gyz077

Janra, M.N., Noske, R.A., Chornelia, A., Handika, H. , Mursyid, A., Agung, A. and Saputra, A. 2018. A second breeding record of Chestnut-naped Forktails Enicurus ruficapillus in Sumatra, and observations suggesting females alone incubate. Kukila, 21, pp.13-16.

Demos, T.C., Achmadi, A.S., Handika, H. , Rowe, K.C. and Esselstyn, J.A. 2017. A new species of shrew (Soricomorpha: Crocidura) from Java, Indonesia: possible character displacement despite interspecific gene flow. Journal of Mammalogy, 98(1), pp.183-193. https://doi.org/10.1093/jmammal/gyw183

Demos, T.C., Achmadi, A.S., Giarla, T.C., Handika, H. , Rowe, K.C. and Esselstyn, J.A. 2016. Local endemism and within‐island diversification of shrews illustrate the importance of speciation in building Sundaland mammal diversity. Molecular ecology, 25(20), pp.5158-5173. https://doi.org/10.1111/mec.13820

Esselstyn, J.A., Achmadi, A.S., Handika, H. and Rowe, K.C. 2015. A hog-nosed shrew rat (Rodentia: Muridae) from Sulawesi Island, Indonesia. Journal of Mammalogy, 96(5), pp.895-907. https://doi.org/10.1093/jmammal/gyv093

Handika, H. , Nurdin, J. and Rizaldi. 2013. Small Terrestrial Mammals Community on Mount Singgalang, West Sumatra. Jurnal Biologi Universitas Andalas, 2(2), pp.103-109. https://doi.org/10.25077/jbioua.2.2.%25p.2013